CDS

Accession Number TCMCG073C03763
gbkey CDS
Protein Id XP_010521561.1
Location join(1624115..1624312,1624590..1624763,1624999..1625098,1625272..1625757,1626407..1626551,1626708..1626736,1627310..1627897,1628274..1628365,1629015..1629088,1629200..1629422,1629735..1629828,1629939..1630093,1630342..1630563,1630950..1631150,1631372..1631497,1631737..1631798,1631914..1632031,1632123..1632407,1632500..1632538)
Gene LOC104800454
GeneID 104800454
Organism Tarenaya hassleriana

Protein

Length 1136aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010523259.1
Definition PREDICTED: LOW QUALITY PROTEIN: peroxisome biogenesis protein 1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category O
Description Peroxisome biogenesis factor 1, N-terminal
KEGG_TC 3.A.20.1
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K13338        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04146        [VIEW IN KEGG]
map04146        [VIEW IN KEGG]
GOs GO:0006082        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006625        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006631        [VIEW IN EMBL-EBI]
GO:0006635        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007031        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009062        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015919        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016054        [VIEW IN EMBL-EBI]
GO:0016558        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0019395        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030258        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034440        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043574        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044282        [VIEW IN EMBL-EBI]
GO:0044743        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046395        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0065002        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071806        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072329        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072662        [VIEW IN EMBL-EBI]
GO:0072663        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATACGGAGGTGGAGGTCCGAGCGGTCGCCGGAATTGGCGACTGTTTTGTCTCTCTCCCTCGTCATCTTCTCCACGTGCTTCAGTCCACAAGCTCCTCTCTTCTTCCTCCTCTGCTTCCGCTCGAGCTCCGCTCCGGCGATCGCCGTTGGTCTGTCGCTTGGTCCGGCTCCACTTCCTCCTCTCCAGCCATCGAGGTATCGAGGGAGTTTGCGGAAAGCATTTCGTTGCCGAATGGTACGGTTGTCCGAGTTCGAGTTCTTGGTAATGTGCCAAAGGCTACTTTAGTTACAGTAGAGCCAGAGACAGAAGATGATTGGGAAGTTCTTGAGCTTAATGCTGAACTTGCTGAAGCAGCTTTACTAAGGCAGGTGAGGATCTTACATGAGGCCATGAAATTCCCATTGTGGTTACATGACCGCACTGTCATTAAGTTTGCTGTGGTTTCAACCTTTCCACCAAAAGGGGTGGTACAACTTGTTCCAGGAACTGAAGTCGCGGTGGCTCCAAAGATGCGCAAGAGAAATCTAAATTCACATGATGTTTCTAATATGGCTTCCTTGGAGAAAGAAAGTATTCATGTGAAAGCTTTGTTACGTGTGCAAGATTCTGATAGATCAGTCTTCCATAAAACTGACGTCAAAGGGGTTGAGCTAAGGGTAGTGCTCACTTCCATTGCTTATATTCATCCAGAAACGGCCAAAAAGTACTATTTAGAGCCACTTCAATTGGTGTCCATTTTGCCTAGATTACCTCTGAGAAATAGTGTGAAGAAGGATGAAGCCTTCAAAATGAAAAGTGATGAATCTCCAAAGGTGGTTGACAATGACCCTCTGAGGGGAAAGAAAGAACCTCGTCAAGTGATTGTCCGACTTATCTTTTCAGATTTAGCAGCCAAAGGACACCTGATGATGGCTGAGTCACTTCGTCTCTATCTAAGAGCAAGCTTGCACTCATGGGTATATGTGAGGGGGTGCAATGTGAAGGTGAATAAAGAAATCCCTGGTCTTTCCCTTTTTCCTTGTATCTTTAAGATGTCTGAGAAAGATAAGCAAGAGCGGGTCGAGATTCTCTCAGTTCTTTCTAGAAAGGTTGGAAATTTCTCTTCTCTCAGATACTCAGCTCGCTGCTGATCTGGCTTAAGCACATATACAGATGTTGTGGACTGGTCCGTGCATGATGAGTTTATCATGTCTCTTTCATCAGAGGATTCTCATAAAGAGGAACAAGGGACTGTTTACCGTCCTGAGAATAATAAAGGATTGAAAGGCCTTCTCCGCCTGTGGTCATTGGCACAGATTAATGCTTTTAAGTCAGTCACTGGAGCTGATGTTCCTGCTTTAATCCTGGGAAGTGAAACACTACTTCATTTTGAAGTGAATGGACTAAAATCTTATGATCGCAGAGGCGGGCAAGCACCTCGTAACGATCATTTGGAAAATGGAAACAGGGATAAAAACCATCCTGTAGAAATTTTATACATAATGAGAATCTCTGACGAGTCTTTGCTTGGGGATAAATCCTTTGCATACAAGGTTACCATGGATAAAATAGATGAGAGCAACAATGTGATGCATATTGATTCAATGGTTGAAAAGATGAATGTTGGTGACCCTATATCTTTCACTTCTGGCAAAGAAAGACGCTCCAACAAAGCTGTTTCTCCCGATATATCCTCCTTGTCCTGGATGGGCACTATTGTTTCAGATGTTATTAAGAGGATGATTGTGTTGTTGTCTCCTGCTGCTGGAATGTGGTTTAGTGAGTACAATATGCCTTCACCTGGACATATTCTCATACACGGGCCTTCAGGGTCTGGGAAAACAATATTATCTAGAGCTGTTGCAAAGTACTTTGAAGAACAAAAAGACGTCTTGGCACATGTGATTTTTGTATCTTGCTCTGCACTTGCCTTGGAGAAGGTCCAAAATATTCATCAAGTACTTTCTGGTGTAATTTCCGAGGGATTGGAAAATGCACCCTCCATCATCATTTTGGATGATCTTAGCAGCATCATCTCGACTTCTTCAGATATGGAAGGAGCCCAAGTTTCAGCAGCAATGACTATGCTAACAAAATTCCTGACTGATGTGATAGATGATTATGGGGAATACAGGAAAAGCTCTTGTGGAATAGGTCCACTTGCCTTTGTTGCTTCTGTACAGTCTCTAGATAACATACCACAAACACTGAGCTCATCAGGAAGATTTGATTTTCATGTTCAACTGGCTGCTCCTGCTACCTCGGAACGGGGGGCCATACTGAAGCATGAGTTACAGAAACGCTCTATACACTGTTCAGAAGATACATTACTGGAAGTAGCTGGAAAGTGCGAAGGATATGATGCATATGACCTGGAAATATTGGTCGATAGAGCTGTTCACTCTGCCATAGGGCGGCATCTGTCTTCTGAATCGGAGATACCCGAACATATTTTGGTCAGAGAAGACTTTACTCGAGCTATGCATGAATTTGTTCCTGTTGCCATGCGGGACATCACAAAATCTGCTTCGGAGGGTGGACGCTCTGGGTGGGAGGATGTTGGTGGAGTGACTGATATTAAAAGTTCCATTAAAGAGATGATTGAATTGCCATCAAGATTTCCAAATATCTTTGCAAAAGCTCCACTGAGGTTGAGATCAAATGTTCTCTTATATGGCCCACCTGGTTGTGGGAAGACCCACATAGTCGGTGCAGCTGCTGCAGCTTGTTCTCTTCGTTTTATATCTGTGAAGGGGCCTGAACTCTTGAACAAATATATCGGTGCTTCTGAGCAAGCTGTTCGCGATATATTTTCAAAAGCAGGAGCTGCAGCACCATGCCTGCTCTTCTTTGATGAATTTGATTCGATTGCTCCAAAGAGAGGACATGACAACACGGGAGTAACTGATCGAGTTGTTAATCAATTTCTGACAGAACTGGATGGAGTTGAAGTTCTAACTGGTGTCTTTGTATTTGCTGCAACAAGTAGACCAGATCTACTTGATCCTGCGCTTCTAAGACCGGGCAGGCTTGATCGTCTTCTTTTCTGTGATTTTCCATCTCAACAAGAGCGGGTCGAGATTCTCTCAGTTCTTTCTAGAAAGCTCCCAATGGCTGGTGACATCGACCTGGATGCTATAGCACAAATGACAGAAGGATTTAGTGGAGCTGACCTCCAAGCTCTTCTCTCAGATACTCAGCTCGCTGCTGTTCACGAATTTCTAAACAAAGAAGACAACCCTGAGCTAGGGAGCATGCCAATGATAACTGACACTCTTCTGAGGTCTGTGGCATCAAAGGCAAAGCCATCGGTTTCAGAGACCGAGAAGCAAAGGCTGTATGCTATATATAGCGAGTTTCTGGATTCAAAAAGATCGGTTTCTGCACAGTCAAGAGATGCAAAGGGCAAAAGAGCAACTTTAGCATAA
Protein:  
MDTEVEVRAVAGIGDCFVSLPRHLLHVLQSTSSSLLPPLLPLELRSGDRRWSVAWSGSTSSSPAIEVSREFAESISLPNGTVVRVRVLGNVPKATLVTVEPETEDDWEVLELNAELAEAALLRQVRILHEAMKFPLWLHDRTVIKFAVVSTFPPKGVVQLVPGTEVAVAPKMRKRNLNSHDVSNMASLEKESIHVKALLRVQDSDRSVFHKTDVKGVELRVVLTSIAYIHPETAKKYYLEPLQLVSILPRLPLRNSVKKDEAFKMKSDESPKVVDNDPLRGKKEPRQVIVRLIFSDLAAKGHLMMAESLRLYLRASLHSWVYVRGCNVKVNKEIPGLSLFPCIFKMSEKDKQERVEILSVLSRKVGNFSSLRYSARCXSGLSTYTDVVDWSVHDEFIMSLSSEDSHKEEQGTVYRPENNKGLKGLLRLWSLAQINAFKSVTGADVPALILGSETLLHFEVNGLKSYDRRGGQAPRNDHLENGNRDKNHPVEILYIMRISDESLLGDKSFAYKVTMDKIDESNNVMHIDSMVEKMNVGDPISFTSGKERRSNKAVSPDISSLSWMGTIVSDVIKRMIVLLSPAAGMWFSEYNMPSPGHILIHGPSGSGKTILSRAVAKYFEEQKDVLAHVIFVSCSALALEKVQNIHQVLSGVISEGLENAPSIIILDDLSSIISTSSDMEGAQVSAAMTMLTKFLTDVIDDYGEYRKSSCGIGPLAFVASVQSLDNIPQTLSSSGRFDFHVQLAAPATSERGAILKHELQKRSIHCSEDTLLEVAGKCEGYDAYDLEILVDRAVHSAIGRHLSSESEIPEHILVREDFTRAMHEFVPVAMRDITKSASEGGRSGWEDVGGVTDIKSSIKEMIELPSRFPNIFAKAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAGAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLFCDFPSQQERVEILSVLSRKLPMAGDIDLDAIAQMTEGFSGADLQALLSDTQLAAVHEFLNKEDNPELGSMPMITDTLLRSVASKAKPSVSETEKQRLYAIYSEFLDSKRSVSAQSRDAKGKRATLA